Integrative visualization of multiple omic data For any question on PaintOmics, users can send a mail to paintomics@cipf.es.

Welcome to PaintOmics v3.0 documentation.

Note: this documentation is temporal, we still developing the tool and we'll fill this documentation as soon as we release a first version.

Anyway, a short description of the application...

PaintOmics is a web tool for the integrative visualization of multiple omic datasets onto KEGG pathways.

PaintOmics consists of three simple steps:

• Data uploading: typically data matrices, containing, for example, gene expression, metabolite levels and metabolite levels for the same set of samples.
• Identifier and Name Matching and Metabolite assignment: as PaintOmics requires Entrez IDs for working with KEGG pathways, the tool will try to convert the names and identifiers from different sources and databases for the input data. Additionally, it's necessary to specify of metabolite assignments in ambiguity cases.
• Pathway selection: finally, PaintOmics will obtain the list of KEGG Pathway that are ?.

Currently PaintOmics supports integrated visualization of multiple species of different biological kingdoms and offers user the possibility to request any other organism present in the KEGG database.